weka.experiment

## Class DatabaseResultProducer

- java.lang.Object
- - weka.experiment.DatabaseUtils
  - - weka.experiment.DatabaseResultListener
    - - weka.experiment.DatabaseResultProducer

- All Implemented Interfaces:
    java.io.Serializable, AdditionalMeasureProducer, OptionHandler, RevisionHandler, ResultListener, ResultProducer

      public class DatabaseResultProducer
      extends DatabaseResultListener
      implements ResultProducer, OptionHandler, AdditionalMeasureProducer

  Examines a database and extracts out the results produced by the specified ResultProducer and submits them to the specified ResultListener. If a result needs to be generated, the ResultProducer is used to obtain the result.

  Valid options are:

       -F <field name>
        The name of the database field to cache over.
        eg: "Fold" (default none)

       -W <class name>
        The full class name of a ResultProducer.
        eg: weka.experiment.CrossValidationResultProducer

       Options specific to result producer weka.experiment.CrossValidationResultProducer:

       -X <number of folds>
        The number of folds to use for the cross-validation.
        (default 10)

       -D
       Save raw split evaluator output.

       -O <file/directory name/path>
        The filename where raw output will be stored.
        If a directory name is specified then then individual
        outputs will be gzipped, otherwise all output will be
        zipped to the named file. Use in conjuction with -D. (default splitEvalutorOut.zip)

       -W <class name>
        The full class name of a SplitEvaluator.
        eg: weka.experiment.ClassifierSplitEvaluator

       Options specific to split evaluator weka.experiment.ClassifierSplitEvaluator:

       -W <class name>
        The full class name of the classifier.
        eg: weka.classifiers.bayes.NaiveBayes

       -C <index>
        The index of the class for which IR statistics
        are to be output. (default 1)

       -I <index>
        The index of an attribute to output in the
        results. This attribute should identify an
        instance in order to know which instances are
        in the test set of a cross validation. if 0
        no output (default 0).

       -P
        Add target and prediction columns to the result
        for each fold.

       Options specific to classifier weka.classifiers.rules.ZeroR:

       -D
        If set, classifier is run in debug mode and
        may output additional info to the console

  Version:
    $Revision: 11247 $
  Author:
    Len Trigg (trigg@cs.waikato.ac.nz)
  See Also:
    Serialized Form

- - ### Field Summary

    - ### Fields inherited from class weka.experiment.DatabaseUtils

      `BOOL, BYTE, DATE, DOUBLE, EXP_INDEX_TABLE, EXP_RESULT_COL, EXP_RESULT_PREFIX, EXP_SETUP_COL, EXP_TYPE_COL, FLOAT, INTEGER, LONG, PROPERTY_FILE, SHORT, STRING, TEXT, TIME`

  - ### Constructor Summary

    Constructors
    Constructor and Description
    `DatabaseResultProducer()` Creates the DatabaseResultProducer, letting the parent constructor do it's thing.

  - ### Method Summary

    Methods
    Modifier and Type | Method and Description
    --- | ---
    `void` | `acceptResult(ResultProducer rp, java.lang.Object[] key, java.lang.Object[] result)` Accepts results from a ResultProducer.
    `void` | `doRun(int run)` Gets the results for a specified run number.
    `void` | `doRunKeys(int run)` Gets the keys for a specified run number.
    `java.util.Enumeration<java.lang.String>` | `enumerateMeasures()` Returns an enumeration of any additional measure names that might be in the result producer
    `java.lang.String` | `getCompatibilityState()` Gets a description of the internal settings of the result producer, sufficient for distinguishing a ResultProducer instance from another with different settings (ignoring those settings set through this interface).
    `java.lang.String[]` | `getKeyNames()` Gets the names of each of the columns produced for a single run.
    `java.lang.Object[]` | `getKeyTypes()` Gets the data types of each of the columns produced for a single run.
    `double` | `getMeasure(java.lang.String additionalMeasureName)` Returns the value of the named measure
    `java.lang.String[]` | `getOptions()` Gets the current settings of the result producer.
    `java.lang.String[]` | `getResultNames()` Gets the names of each of the columns produced for a single run.
    `ResultProducer` | `getResultProducer()` Get the ResultProducer.
    `java.lang.Object[]` | `getResultTypes()` Gets the data types of each of the columns produced for a single run.
    `java.lang.String` | `getRevision()` Returns the revision string.
    `java.lang.String` | `globalInfo()` Returns a string describing this result producer
    `boolean` | `isResultRequired(ResultProducer rp, java.lang.Object[] key)` Determines whether the results for a specified key must be generated.
    `java.util.Enumeration<Option>` | `listOptions()` Returns an enumeration describing the available options..
    `void` | `postProcess()` When this method is called, it indicates that no more requests to generate results for the current experiment will be sent.
    `void` | `postProcess(ResultProducer rp)` When this method is called, it indicates that no more results will be sent that need to be grouped together in any way.
    `void` | `preProcess()` Prepare to generate results.
    `void` | `preProcess(ResultProducer rp)` Prepare for the results to be received.
    `java.lang.String` | `resultProducerTipText()` Returns the tip text for this property
    `void` | `setAdditionalMeasures(java.lang.String[] additionalMeasures)` Set a list of method names for additional measures to look for in SplitEvaluators.
    `void` | `setInstances(Instances instances)` Sets the dataset that results will be obtained for.
    `void` | `setOptions(java.lang.String[] options)` Parses a given list of options.
    `void` | `setResultListener(ResultListener listener)` Sets the object to send results of each run to.
    `void` | `setResultProducer(ResultProducer newResultProducer)` Set the ResultProducer.
    `java.lang.String` | `toString()` Gets a text descrption of the result producer.

    - ### Methods inherited from class weka.experiment.DatabaseResultListener

      `cacheKeyNameTipText, determineColumnConstraints, getCacheKeyName, setCacheKeyName`

    - ### Methods inherited from class weka.experiment.DatabaseUtils

      `arrayToString, attributeCaseFix, close, close, connectToDatabase, createExperimentIndex, createExperimentIndexEntry, createResultsTable, databaseURLTipText, debugTipText, disconnectFromDatabase, execute, experimentIndexExists, getDatabaseURL, getDebug, getKeywords, getKeywordsMaskChar, getPassword, getResultFromTable, getResultSet, getResultsTableName, getSupportedCursorScrollType, getUsername, initialize, initialize, isConnected, isCursorScrollable, isCursorScrollSensitive, isKeyword, maskKeyword, passwordTipText, processKeyString, putResultInTable, select, setDatabaseURL, setDebug, setKeywords, setKeywordsMaskChar, setPassword, setUsername, tableExists, translateDBColumnType, typeName, update, usernameTipText`

    - ### Methods inherited from class java.lang.Object

      `equals, getClass, hashCode, notify, notifyAll, wait, wait, wait`

- - ### Constructor Detail

    - #### DatabaseResultProducer

          public DatabaseResultProducer()
                                 throws java.lang.Exception

      Creates the DatabaseResultProducer, letting the parent constructor do it's thing.
      Throws:
        `java.lang.Exception` - if an error occurs

  - ### Method Detail

    - #### globalInfo

          public java.lang.String globalInfo()

      Returns a string describing this result producer
      Overrides:
        `globalInfo` in class `DatabaseResultListener`
      Returns:
        a description of the result producer suitable for displaying in the explorer/experimenter gui

    - #### doRunKeys

          public void doRunKeys(int run)
                         throws java.lang.Exception

      Gets the keys for a specified run number. Different run numbers correspond to different randomizations of the data. Keys produced should be sent to the current ResultListener
      Specified by:
        `doRunKeys` in interface `ResultProducer`
      Parameters:
        `run` - the run number to get keys for.
      Throws:
        `java.lang.Exception` - if a problem occurs while getting the keys

    - #### doRun

          public void doRun(int run)
                     throws java.lang.Exception

      Gets the results for a specified run number. Different run numbers correspond to different randomizations of the data. Results produced should be sent to the current ResultListener
      Specified by:
        `doRun` in interface `ResultProducer`
      Parameters:
        `run` - the run number to get results for.
      Throws:
        `java.lang.Exception` - if a problem occurs while getting the results

    - #### preProcess

          public void preProcess(ResultProducer rp)
                          throws java.lang.Exception

      Prepare for the results to be received.
      Specified by:
        `preProcess` in interface `ResultListener`
      Overrides:
        `preProcess` in class `DatabaseResultListener`
      Parameters:
        `rp` - the ResultProducer that will generate the results
      Throws:
        `java.lang.Exception` - if an error occurs during preprocessing.

    - #### postProcess

          public void postProcess(ResultProducer rp)
                           throws java.lang.Exception

      When this method is called, it indicates that no more results will be sent that need to be grouped together in any way.
      Specified by:
        `postProcess` in interface `ResultListener`
      Overrides:
        `postProcess` in class `DatabaseResultListener`
      Parameters:
        `rp` - the ResultProducer that generated the results
      Throws:
        `java.lang.Exception` - if an error occurs

    - #### preProcess

          public void preProcess()
                          throws java.lang.Exception

      Prepare to generate results. The ResultProducer should call preProcess(this) on the ResultListener it is to send results to.
      Specified by:
        `preProcess` in interface `ResultProducer`
      Throws:
        `java.lang.Exception` - if an error occurs during preprocessing.

    - #### postProcess

          public void postProcess()
                           throws java.lang.Exception

      When this method is called, it indicates that no more requests to generate results for the current experiment will be sent. The ResultProducer should call preProcess(this) on the ResultListener it is to send results to.
      Specified by:
        `postProcess` in interface `ResultProducer`
      Throws:
        `java.lang.Exception` - if an error occurs

    - #### acceptResult

          public void acceptResult(ResultProducer rp,
                          java.lang.Object[] key,
                          java.lang.Object[] result)
                            throws java.lang.Exception

      Accepts results from a ResultProducer.
      Specified by:
        `acceptResult` in interface `ResultListener`
      Overrides:
        `acceptResult` in class `DatabaseResultListener`
      Parameters:
        `rp` - the ResultProducer that generated the results
        `key` - an array of Objects (Strings or Doubles) that uniquely identify a result for a given ResultProducer with given compatibilityState
        `result` - the results stored in an array. The objects stored in the array may be Strings, Doubles, or null (for the missing value).
      Throws:
        `java.lang.Exception` - if the result could not be accepted.

    - #### isResultRequired

          public boolean isResultRequired(ResultProducer rp,
                                 java.lang.Object[] key)
                                   throws java.lang.Exception

      Determines whether the results for a specified key must be generated.
      Specified by:
        `isResultRequired` in interface `ResultListener`
      Overrides:
        `isResultRequired` in class `DatabaseResultListener`
      Parameters:
        `rp` - the ResultProducer wanting to generate the results
        `key` - an array of Objects (Strings or Doubles) that uniquely identify a result for a given ResultProducer with given compatibilityState
      Returns:
        true if the result should be generated
      Throws:
        `java.lang.Exception` - if it could not be determined if the result is needed.

    - #### getKeyNames

          public java.lang.String[] getKeyNames()
                                         throws java.lang.Exception

      Gets the names of each of the columns produced for a single run.
      Specified by:
        `getKeyNames` in interface `ResultProducer`
      Returns:
        an array containing the name of each column
      Throws:
        `java.lang.Exception` - if something goes wrong.

    - #### getKeyTypes

          public java.lang.Object[] getKeyTypes()
                                         throws java.lang.Exception

      Gets the data types of each of the columns produced for a single run. This method should really be static.
      Specified by:
        `getKeyTypes` in interface `ResultProducer`
      Returns:
        an array containing objects of the type of each column. The objects should be Strings, or Doubles.
      Throws:
        `java.lang.Exception` - if something goes wrong.

    - #### getResultNames

          public java.lang.String[] getResultNames()
                                            throws java.lang.Exception

      Gets the names of each of the columns produced for a single run. A new result field is added for the number of results used to produce each average. If only averages are being produced the names are not altered, if standard deviations are produced then "Dev_" and "Avg_" are prepended to each result deviation and average field respectively.
      Specified by:
        `getResultNames` in interface `ResultProducer`
      Returns:
        an array containing the name of each column
      Throws:
        `java.lang.Exception` - if something goes wrong.

    - #### getResultTypes

          public java.lang.Object[] getResultTypes()
                                            throws java.lang.Exception

      Gets the data types of each of the columns produced for a single run.
      Specified by:
        `getResultTypes` in interface `ResultProducer`
      Returns:
        an array containing objects of the type of each column. The objects should be Strings, or Doubles.
      Throws:
        `java.lang.Exception` - if something goes wrong.

    - #### getCompatibilityState

          public java.lang.String getCompatibilityState()

      Gets a description of the internal settings of the result producer, sufficient for distinguishing a ResultProducer instance from another with different settings (ignoring those settings set through this interface). For example, a cross-validation ResultProducer may have a setting for the number of folds. For a given state, the results produced should be compatible. Typically if a ResultProducer is an OptionHandler, this string will represent the command line arguments required to set the ResultProducer to that state.
      Specified by:
        `getCompatibilityState` in interface `ResultProducer`
      Returns:
        the description of the ResultProducer state, or null if no state is defined

    - #### listOptions

          public java.util.Enumeration<Option> listOptions()

      Returns an enumeration describing the available options..
      Specified by:
        `listOptions` in interface `OptionHandler`
      Returns:
        an enumeration of all the available options.

    - #### setOptions

          public void setOptions(java.lang.String[] options)
                          throws java.lang.Exception

      Parses a given list of options.

      Valid options are:

           -F <field name>
            The name of the database field to cache over.
            eg: "Fold" (default none)

           -W <class name>
            The full class name of a ResultProducer.
            eg: weka.experiment.CrossValidationResultProducer

           Options specific to result producer weka.experiment.CrossValidationResultProducer:

           -X <number of folds>
            The number of folds to use for the cross-validation.
            (default 10)

           -D
           Save raw split evaluator output.

           -O <file/directory name/path>
            The filename where raw output will be stored.
            If a directory name is specified then then individual
            outputs will be gzipped, otherwise all output will be
            zipped to the named file. Use in conjuction with -D. (default splitEvalutorOut.zip)

           -W <class name>
            The full class name of a SplitEvaluator.
            eg: weka.experiment.ClassifierSplitEvaluator

           Options specific to split evaluator weka.experiment.ClassifierSplitEvaluator:

           -W <class name>
            The full class name of the classifier.
            eg: weka.classifiers.bayes.NaiveBayes

           -C <index>
            The index of the class for which IR statistics
            are to be output. (default 1)

           -I <index>
            The index of an attribute to output in the
            results. This attribute should identify an
            instance in order to know which instances are
            in the test set of a cross validation. if 0
            no output (default 0).

           -P
            Add target and prediction columns to the result
            for each fold.

           Options specific to classifier weka.classifiers.rules.ZeroR:

           -D
            If set, classifier is run in debug mode and
            may output additional info to the console

      All option after -- will be passed to the result producer.
      Specified by:
        `setOptions` in interface `OptionHandler`
      Parameters:
        `options` - the list of options as an array of strings
      Throws:
        `java.lang.Exception` - if an option is not supported

    - #### getOptions

          public java.lang.String[] getOptions()

      Gets the current settings of the result producer.
      Specified by:
        `getOptions` in interface `OptionHandler`
      Returns:
        an array of strings suitable for passing to setOptions

    - #### setAdditionalMeasures

          public void setAdditionalMeasures(java.lang.String[] additionalMeasures)

      Set a list of method names for additional measures to look for in SplitEvaluators. This could contain many measures (of which only a subset may be produceable by the current resultProducer) if an experiment is the type that iterates over a set of properties.
      Specified by:
        `setAdditionalMeasures` in interface `ResultProducer`
      Parameters:
        `additionalMeasures` - an array of measure names, null if none

    - #### enumerateMeasures

          public java.util.Enumeration<java.lang.String> enumerateMeasures()

      Returns an enumeration of any additional measure names that might be in the result producer
      Specified by:
        `enumerateMeasures` in interface `AdditionalMeasureProducer`
      Returns:
        an enumeration of the measure names

    - #### getMeasure

          public double getMeasure(java.lang.String additionalMeasureName)

      Returns the value of the named measure
      Specified by:
        `getMeasure` in interface `AdditionalMeasureProducer`
      Parameters:
        `additionalMeasureName` - the name of the measure to query for its value
      Returns:
        the value of the named measure
      Throws:
        `java.lang.IllegalArgumentException` - if the named measure is not supported

    - #### setInstances

          public void setInstances(Instances instances)

      Sets the dataset that results will be obtained for.
      Specified by:
        `setInstances` in interface `ResultProducer`
      Parameters:
        `instances` - a value of type 'Instances'.

    - #### setResultListener

          public void setResultListener(ResultListener listener)

      Sets the object to send results of each run to.
      Specified by:
        `setResultListener` in interface `ResultProducer`
      Parameters:
        `listener` - a value of type 'ResultListener'

    - #### resultProducerTipText

          public java.lang.String resultProducerTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getResultProducer

          public ResultProducer getResultProducer()

      Get the ResultProducer.
      Returns:
        the ResultProducer.

    - #### setResultProducer

          public void setResultProducer(ResultProducer newResultProducer)

      Set the ResultProducer.
      Parameters:
        `newResultProducer` - new ResultProducer to use.

    - #### toString

          public java.lang.String toString()

      Gets a text descrption of the result producer.
      Overrides:
        `toString` in class `java.lang.Object`
      Returns:
        a text description of the result producer.

    - #### getRevision

          public java.lang.String getRevision()

      Returns the revision string.
      Specified by:
        `getRevision` in interface `RevisionHandler`
      Overrides:
        `getRevision` in class `DatabaseResultListener`
      Returns:
        the revision